dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01260
Location and strand information: 38441 - 39088 (-)
Family: 2.A.38.4.4
Protein type: TC
Protein description: Ktr system potassium uptake protein A

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01261
Location and strand information: 39108 - 40448 (-)
Family: 2.A.38.4.1
Protein type: TC
Protein description: Potassium/sodium uptake protein NtpJ

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01262
Location and strand information: 40835 - 41548 (+)
Family: LytTR
Protein type: TF
Protein description: Transcriptional regulatory protein BtsR

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01263
Location and strand information: 41613 - 42335 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01264
Location and strand information: 42553 - 44421 (+)
Family: 3.A.1.111.2
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01265
Location and strand information: 44418 - 46292 (+)
Family: 3.A.1.111.2
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01266
Location and strand information: 46519 - 46683 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01267
Location and strand information: 46700 - 47854 (+)
Family: GntR
Protein type: TF
Protein description: Arabinose metabolism transcriptional repressor

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01268
Location and strand information: 47898 - 49397 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.0945
Protein molecular weight: 56409.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01269
Location and strand information: 49537 - 50379 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01270
Location and strand information: 50376 - 51485 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01271
Location and strand information: 51482 - 52978 (+)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01272
Location and strand information: 53129 - 54178 (+)
Family: 3.A.1.2.1
Protein type: TC
Protein description: Fructose import binding protein FruE

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01273
Location and strand information: 54371 - 55888 (+)
Family: 3.A.1.2.23
Protein type: TC
Protein description: Fructose import ATP-binding protein FruK

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01274
Location and strand information: 55885 - 56946 (+)
Family: 3.A.1.2.14
Protein type: TC
Protein description: Fructose import permease protein FruF

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01275
Location and strand information: 56948 - 57973 (+)
Family: 3.A.1.2.14
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YjfF

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01276
Location and strand information: 58142 - 59833 (+)
Family: MCPsignal
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01277
Location and strand information: 59846 - 60937 (+)
Family: 3.A.1.2.25
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01278
Location and strand information: 61053 - 61910 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01279
Location and strand information: 62090 - 64018 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 5.1434
Protein molecular weight: 72670.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01280
Location and strand information: 64086 - 64979 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01281
Location and strand information: 65349 - 67001 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01282
Location and strand information: 67064 - 67999 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000004114_12|CGC1
Gene ID: MGYG000004114_01283
Location and strand information: 68013 - 68900 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: Lactose transport system permease protein LacG

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004114_01260	Ktr system potassium uptake protein A	TC	38441	39088	-	2.A.38.4.4
MGYG000004114_01261	Potassium/sodium uptake protein NtpJ	TC	39108	40448	-	2.A.38.4.1
MGYG000004114_01262	Transcriptional regulatory protein BtsR	TF	40835	41548	+	LytTR
MGYG000004114_01263	hypothetical protein	null	41613	42335	+	SPOB_a\| HATPase_c_5
MGYG000004114_01264	Vitamin B12 import ATP-binding protein BtuD	TC	42553	44421	+	3.A.1.111.2
MGYG000004114_01265	Vitamin B12 import ATP-binding protein BtuD	TC	44418	46292	+	3.A.1.111.2
MGYG000004114_01266	hypothetical protein	null	46519	46683	+	No domain
MGYG000004114_01267	Arabinose metabolism transcriptional repressor	TF	46700	47854	+	GntR
MGYG000004114_01268	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	47898	49397	-	GH51
MGYG000004114_01269	HTH-type transcriptional activator RhaR	TF	49537	50379	+	HTH_AraC
MGYG000004114_01270	HTH-type transcriptional activator RhaR	TF	50376	51485	+	HTH_AraC+HTH_AraC
MGYG000004114_01271	hypothetical protein	TC	51482	52978	+	9.B.33.1.1
MGYG000004114_01272	Fructose import binding protein FruE	TC	53129	54178	+	3.A.1.2.1
MGYG000004114_01273	Fructose import ATP-binding protein FruK	TC	54371	55888	+	3.A.1.2.23
MGYG000004114_01274	Fructose import permease protein FruF	TC	55885	56946	+	3.A.1.2.14
MGYG000004114_01275	Inner membrane ABC transporter permease protein YjfF	TC	56948	57973	+	3.A.1.2.14
MGYG000004114_01276	hypothetical protein	STP	58142	59833	+	MCPsignal
MGYG000004114_01277	hypothetical protein	TC	59846	60937	+	3.A.1.2.25
MGYG000004114_01278	HTH-type transcriptional activator RhaS	TF	61053	61910	+	HTH_AraC
MGYG000004114_01279	Non-reducing end beta-L-arabinofuranosidase	CAZyme	62090	64018	+	GH127
MGYG000004114_01280	HTH-type transcriptional activator RhaR	TF	64086	64979	-	HTH_AraC+HTH_AraC
MGYG000004114_01281	hypothetical protein	STP	65349	67001	+	SBP_bac_1
MGYG000004114_01282	putative multiple-sugar transport system permease YteP	TC	67064	67999	+	3.A.1.1.10
MGYG000004114_01283	Lactose transport system permease protein LacG	TC	68013	68900	+	3.A.1.1.10
Protein ID	Protein Name	Type	Start	End	Strand	Signature